STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdPhosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family. (288 aa)    
Predicted Functional Partners:
pssA
Phosphatidylserine synthase.
 
 
 0.996
AEB30988.1
4-hydroxybenzoate octaprenyltransferase-like protein.
 
   
 0.877
yvkC
Putative phosphotransferase.
 
    0.869
pps
Phosphoenolpyruvate synthase.
 
    0.861
AEB30990.1
Hypothetical protein.
 
    0.801
cdsA2
Phosphatidate cytidylyltransferase.
 
 
 0.727
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.513
ywiB
Hypothetical protein.
   
    0.451
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
  
 0.446
cdsA1
Phosphatidate cytidylyltransferase; CDP-diglyceride synthase; Belongs to the CDS family.
     
 0.438
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.