STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vanSSensor protein VanS. (379 aa)    
Predicted Functional Partners:
vanR
Regulatory protein VanR.
 
 0.963
ykoG
Two-component response regulator.
 
 0.846
yclJ
Two-component response regulator.
 
 0.822
walR
Two-component response regulator.
 
 0.788
phoP
Two-component response regulator.
 
 0.784
kdpE
KDP operon transcriptional regulatory protein.
 
 0.726
resD
Two-component response regulator.
 
 0.652
dacA
D-alanyl-D-alanine carboxypeptidase DacA; Belongs to the peptidase S11 family.
  
  
 0.610
cheR
Methyl-accepting chemotaxis proteins (MCPs) methyltransferase.
      0.604
AEB29044.1
Hypothetical protein.
 
     0.603
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.