STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vanRRegulatory protein VanR. (229 aa)    
Predicted Functional Partners:
vanS
Sensor protein VanS.
 
 0.963
ykoH
Two-component sensor histidine kinase.
 
 0.907
yclK
Two-component sensor histidine kinase.
 
 0.891
phoR
Two-component sensor histidine kinase.
 
 0.812
yxdK
Two-component sensor histidine kinase.
 
 0.806
walK
Two-component sensor histidine kinase.
 
 0.801
resE
Two-component sensor histidine kinase.
 
 0.780
AEB29725.1
Hypothetical protein.
  
 
 0.678
cheY
Regulator of chemotaxis and motility.
  
   
 0.613
guaB
Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.595
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.