STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636425_01554Unannotated protein. (431 aa)    
Predicted Functional Partners:
GCA_001636425_01555
Unannotated protein.
  
 0.973
GCA_001636425_01552
Unannotated protein.
 
    0.894
GCA_001636425_01553
Unannotated protein.
 
     0.880
GCA_001636425_01572
Unannotated protein.
  
     0.657
GCA_001636425_01556
Unannotated protein.
       0.642
GCA_001636425_01533
Unannotated protein.
 
  
 0.593
GCA_001636425_04923
Unannotated protein.
  
     0.533
GCA_001636425_02050
Unannotated protein.
 
  
 0.511
GCA_001636425_01550
Unannotated protein.
 
     0.486
GCA_001636425_01538
Unannotated protein.
  
     0.475
Your Current Organism:
Bacillus acidicola
NCBI taxonomy Id: 209389
Other names: ATCC BAA-366, B. acidicola, Bacillus acidicola Albert et al. 2005, Bacillus acidogenesis, DSM 14745, NRRL B-23453, strain 105-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.