STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636425_03168Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_001636425_02503
Unannotated protein.
    
 0.840
GCA_001636425_01829
Unannotated protein.
  
 
 0.819
GCA_001636425_00091
Unannotated protein.
  
 0.740
GCA_001636425_01141
Unannotated protein.
  
 0.740
GCA_001636425_01095
Unannotated protein.
  
  
  0.725
GCA_001636425_02674
Unannotated protein.
    
 0.711
GCA_001636425_04356
Unannotated protein.
  
  
 
0.661
GCA_001636425_00503
Unannotated protein.
  
  
  0.649
GCA_001636425_00111
Unannotated protein.
  
 0.645
GCA_001636425_01114
Unannotated protein.
  
 0.645
Your Current Organism:
Bacillus acidicola
NCBI taxonomy Id: 209389
Other names: ATCC BAA-366, B. acidicola, Bacillus acidicola Albert et al. 2005, Bacillus acidogenesis, DSM 14745, NRRL B-23453, strain 105-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.