STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636425_04894Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_001636425_03849
Unannotated protein.
  
     0.584
GCA_001636425_00715
Unannotated protein.
  
     0.574
GCA_001636425_04401
Unannotated protein.
  
     0.503
GCA_001636425_04679
Unannotated protein.
  
     0.502
GCA_001636425_03551
Unannotated protein.
  
     0.499
GCA_001636425_04893
Unannotated protein.
       0.463
GCA_001636425_03206
Unannotated protein.
  
     0.426
GCA_001636425_04107
Unannotated protein.
  
     0.408
GCA_001636425_04814
Unannotated protein.
  
     0.403
Your Current Organism:
Bacillus acidicola
NCBI taxonomy Id: 209389
Other names: ATCC BAA-366, B. acidicola, Bacillus acidicola Albert et al. 2005, Bacillus acidogenesis, DSM 14745, NRRL B-23453, strain 105-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.