Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAQ54226.1 | BAQ54227.1 | MARG145_0067 | MARG145_0068 | Hypothetical protein. | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | 0.565 |
| BAQ54226.1 | BAQ54228.1 | MARG145_0067 | MARG145_0069 | Hypothetical protein. | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | 0.528 |
| BAQ54226.1 | hsdM | MARG145_0067 | MARG145_0062 | Hypothetical protein. | N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.757 |
| BAQ54226.1 | hsdM-2 | MARG145_0067 | MARG145_0074 | Hypothetical protein. | COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.757 |
| BAQ54226.1 | hsdM-4 | MARG145_0067 | MARG145_0573 | Hypothetical protein. | COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.757 |
| BAQ54226.1 | hsdR | MARG145_0067 | MARG145_0071 | Hypothetical protein. | Type I restriction modification system endonuclease (R) subunit HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.647 |
| BAQ54226.1 | xerD | MARG145_0067 | MARG145_0066 | Hypothetical protein. | Integrase; COG4974 Site-specific recombinase XerD [DNA replication, recombination, and repair]; Belongs to the 'phage' integrase family. | 0.778 |
| BAQ54227.1 | BAQ54226.1 | MARG145_0068 | MARG145_0067 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | Hypothetical protein. | 0.565 |
| BAQ54227.1 | BAQ54228.1 | MARG145_0068 | MARG145_0069 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | 0.632 |
| BAQ54227.1 | hsdM | MARG145_0068 | MARG145_0062 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.755 |
| BAQ54227.1 | hsdM-2 | MARG145_0068 | MARG145_0074 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.755 |
| BAQ54227.1 | hsdM-4 | MARG145_0068 | MARG145_0573 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | 0.755 |
| BAQ54227.1 | hsdR | MARG145_0068 | MARG145_0071 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | Type I restriction modification system endonuclease (R) subunit HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.708 |
| BAQ54227.1 | xerD | MARG145_0068 | MARG145_0066 | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | Integrase; COG4974 Site-specific recombinase XerD [DNA replication, recombination, and repair]; Belongs to the 'phage' integrase family. | 0.573 |
| BAQ54228.1 | BAQ54226.1 | MARG145_0069 | MARG145_0067 | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | Hypothetical protein. | 0.528 |
| BAQ54228.1 | BAQ54227.1 | MARG145_0069 | MARG145_0068 | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | 0.632 |
| BAQ54228.1 | hsdR | MARG145_0069 | MARG145_0071 | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | Type I restriction modification system endonuclease (R) subunit HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.835 |
| BAQ54228.1 | xerD | MARG145_0069 | MARG145_0066 | Putative DNA recombinase RecG; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]. | Integrase; COG4974 Site-specific recombinase XerD [DNA replication, recombination, and repair]; Belongs to the 'phage' integrase family. | 0.414 |
| hsdM | BAQ54226.1 | MARG145_0062 | MARG145_0067 | N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | Hypothetical protein. | 0.757 |
| hsdM | BAQ54227.1 | MARG145_0062 | MARG145_0068 | N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit [Defense mechanisms]. | Hypothetical protein; Pfam01420 Methylase_S Type I restriction modification DNA specificity domain, This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit ( [...] | 0.755 |
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