STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ54282.1Predicted transmembrane protein. (168 aa)    
Predicted Functional Partners:
tpiA
COG0149 Triosephosphate isomerase [Carbohydrate transport and metabolism].
       0.630
oppC
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
       0.543
oppD
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Belongs to the ABC transporter superfamily.
       0.537
appF
Oligopeptide transport ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]; COG4608 ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]; Belongs to the ABC transporter superfamily.
       0.536
oppB
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
       0.502
oppA
Oligopeptide ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism].
       0.502
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.