STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potEHypothetical protein; COG0531 Amino acid transporters [Amino acid transport and metabolism]; predicted transmembrane protein, putative aminoacid permease. (600 aa)    
Predicted Functional Partners:
amyA
Glucan 1,6-alpha-glucosidase; COG0366 Glycosidases [Carbohydrate transport and metabolism].
  
 0.999
zip
Hypothetical protein; Pfam02535 ZIP Zinc transporter, The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family; predicted transmembrane protein.
 
     0.762
BAQ54562.1
Alkylphosphonate ABC transporter substrate-binding component; Pfam06646, Mycoplasma_p37, High affinity transport system protein p37, This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.
  
     0.748
BAQ54541.1
Hypothetical protein; COG1284 Uncharacterized conserved protein [Function unknown]; putative transmembrane protein.
 
     0.698
BAQ54453.1
Membrane nuclease A; Cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like, This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds; predicted lipoprotein.
 
 
   0.690
yqaJ
Hypothetical protein; Pfam09588 YqaJ YqaJ-like viral recombinase domain, This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.
  
     0.621
mgtA
Caion-transporting P-type ATPase; COG0474 Cation transport ATPase [Inorganic ion transport and metabolism]; COG4087 Soluble P-type ATPase [General function prediction only].
   
 
 0.613
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
 
 
   0.612
BAQ54445.1
Hypothetical protein; COG0510 Thiamine kinase and related kinases [Coenzyme transport and metabolism].
 
 
 0.603
BAQ54461.1
Hypothetical protein; COG0679 Predicted permeases [General function prediction only]; putative malate permease.
 
    0.581
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.