STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnjBHypothetical protein; COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]; putative mRNA degradation ribonuclease. (551 aa)    
Predicted Functional Partners:
mbl
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases [General function prediction only]; COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]; putative metallo-beta-lactamase.
 
 
0.939
BAQ54450.1
Hypothetical protein; PTZ00121, MAEBL, Provisional; predicted transmembrane protein.
       0.791
BAQ54449.1
Predicted transmembrane protein.
       0.759
lemA
Hypothetical protein; COG1704 Uncharacterized conserved protein [Function unknown]; predicted transmembrane protein.
       0.552
ycfN
Phosphotransferase system PTS lichenan-specific IIa component; COG0510 Thiamine kinase and related kinases [Coenzyme transport and metabolism].
 
     0.496
tnpA2-5
COG2826 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].
       0.487
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.