STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ54526.1Hypothetical protein; Pfam07155, ECF-ribofla_trS, ECF-type riboflavin transporter, S component, This family is the substrate-binding component (S component) of the energy coupling-factor (ECF)-type riboflavin transporter. It is a transmembrane protein which binds riboflavin, and is responsible for riboflavin-uptake by cells; predicted transmembrane protein. (259 aa)    
Predicted Functional Partners:
potD
Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]; predicted transmembrane protein.
  
     0.753
BAQ54484.1
Predicted transmembrane protein.
  
     0.736
BAQ54350.1
Hypothetical protein; COG1284 Uncharacterized conserved protein [Function unknown]; putative transmembrane protein.
  
     0.733
BAQ54194.1
Hypothetical protein; Pfam11074 DUF2779 Domain of unknown function(DUF2779), This domain is conserved in bacteria. The function is not known; predicted DUF2779 family.
  
     0.719
oppA
Oligopeptide ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism].
  
     0.710
BAQ54541.1
Hypothetical protein; COG1284 Uncharacterized conserved protein [Function unknown]; putative transmembrane protein.
  
     0.702
BAQ54574.1
Membrane protein P80.
  
     0.698
BAQ54635.1
ATP-binding protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].
  
     0.674
BAQ54613.1
Pfam03305, Lipoprotein_X, Mycoplasma MG185/MG260 protein, Most of the aligned regions in this family are found towards the middle of the member proteins; pfam03202, Lipoprotein_10, Putative mycoplasma lipoprotein, C-terminal region; predicted lipoprotein.
  
     0.658
BAQ54397.1
COG4684 Predicted membrane protein [Function unknown]; predicted transmembrane protein; putative carbohydrate kinase.
  
     0.655
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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