Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAQ54327.1 | BAQ54580.1 | MARG145_0236 | MARG145_0634 | Hypothetical protein. | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.682 |
| BAQ54579.1 | BAQ54580.1 | MARG145_0633 | MARG145_0634 | Hypothetical protein. | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.444 |
| BAQ54580.1 | BAQ54327.1 | MARG145_0634 | MARG145_0236 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | Hypothetical protein. | 0.682 |
| BAQ54580.1 | BAQ54579.1 | MARG145_0634 | MARG145_0633 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | Hypothetical protein. | 0.444 |
| BAQ54580.1 | BAQ54613.1 | MARG145_0634 | MARG145_0683 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | Pfam03305, Lipoprotein_X, Mycoplasma MG185/MG260 protein, Most of the aligned regions in this family are found towards the middle of the member proteins; pfam03202, Lipoprotein_10, Putative mycoplasma lipoprotein, C-terminal region; predicted lipoprotein. | 0.682 |
| BAQ54580.1 | dnaA | MARG145_0634 | MARG145_0593 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.724 |
| BAQ54580.1 | ftsZ | MARG145_0634 | MARG145_0122 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.442 |
| BAQ54580.1 | topA | MARG145_0634 | MARG145_0033 | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.822 |
| BAQ54613.1 | BAQ54580.1 | MARG145_0683 | MARG145_0634 | Pfam03305, Lipoprotein_X, Mycoplasma MG185/MG260 protein, Most of the aligned regions in this family are found towards the middle of the member proteins; pfam03202, Lipoprotein_10, Putative mycoplasma lipoprotein, C-terminal region; predicted lipoprotein. | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.682 |
| dnaA | BAQ54580.1 | MARG145_0593 | MARG145_0634 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.724 |
| dnaA | topA | MARG145_0593 | MARG145_0033 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.801 |
| ftsZ | BAQ54580.1 | MARG145_0122 | MARG145_0634 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.442 |
| ftsZ | topA | MARG145_0122 | MARG145_0033 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.813 |
| topA | BAQ54580.1 | MARG145_0033 | MARG145_0634 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | Hypothetical protein; Pfam13424, TPR_12, Tetratricopeptide repeat. | 0.822 |
| topA | dnaA | MARG145_0033 | MARG145_0593 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.801 |
| topA | ftsZ | MARG145_0033 | MARG145_0122 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.813 |