STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpACOG1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]; COG1178 ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]. (341 aa)    
Predicted Functional Partners:
BAQ54615.1
ABC transporter ATP binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]; COG3839 ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].
 
 
 0.999
ugpE
COG0395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; COG3833 ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].
 
 
 0.999
BAQ54613.1
Pfam03305, Lipoprotein_X, Mycoplasma MG185/MG260 protein, Most of the aligned regions in this family are found towards the middle of the member proteins; pfam03202, Lipoprotein_10, Putative mycoplasma lipoprotein, C-terminal region; predicted lipoprotein.
 
  
 0.801
snc-2
Hypothetical protein; COG1525 Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair]; predicted lipoprotein.
     
 0.798
amyA
Glucan 1,6-alpha-glucosidase; COG0366 Glycosidases [Carbohydrate transport and metabolism].
 
  
 0.606
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.415
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.