STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ54663.1Predicted transmembrane protein. (249 aa)    
Predicted Functional Partners:
cof-4
Hypothetical protein; COG0560 Phosphoserine phosphatase [Amino acid transport and metabolism]; COG0561 Predicted hydrolases of the HAD superfamily [General function prediction only]; putative COF family HAD hydrolase.
       0.689
BAQ54665.1
Hypothetical protein.
       0.689
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.604
rmuC
DNA recombination protein; COG1322 Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only].
       0.552
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.435
trxB
COG0492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; COG0665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; COG1635 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism].
       0.435
ugpB
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].
       0.435
BAQ54670.1
Hypothetical protein.
       0.427
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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