STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ54688.1Hypothetical protein. (743 aa)    
Predicted Functional Partners:
BAQ54327.1
Hypothetical protein.
 
 
0.999
BAQ54613.1
Pfam03305, Lipoprotein_X, Mycoplasma MG185/MG260 protein, Most of the aligned regions in this family are found towards the middle of the member proteins; pfam03202, Lipoprotein_10, Putative mycoplasma lipoprotein, C-terminal region; predicted lipoprotein.
  
 
 0.999
BAQ54682.1
Hypothetical protein; TIGR04273, Y_sulf_Ax21, sulfation-dependent quorum factor, Ax21 family, This family consists of proteins closely related to Ax21 (Activator of XA21-mediated immunity), a protein that is secreted by a type I secretion system (RaxABC), and that appears to be sulfated on an N-terminal region tryosine in a motif LSYN. Ax21 acts in a quorum-sensing system. Homologous peptide-mediated quorum-sensing systems appear to exist in other species, such as the emerging opportunistic pathogen Stenotrophomonas maltophilia. Intriguingly, the rice genome encodes a receptor (XA21) f [...]
 
   
 0.945
atpG-2
Hypothetical protein; COG0224 F0F1-type ATP synthase, gamma subunit [Energy production and conversion]; putative ATP synthase gamma subunit.
 
   
 0.945
BAQ54687.1
COG5192 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]; predicted lipoprotein.
 
     0.936
BAQ54675.1
Hypothetical protein; COG0793 Periplasmic protease [Cell envelope biogenesis, outer membrane]; predicted lipoprotein.
 
 
 
 0.864
BAQ54326.1
COG3883 Uncharacterized protein conserved in bacteria [Function unknown]; pfam01732, DUF31, Putative peptidase (DUF31), This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function; predicted lipoprotein.
 
     0.801
atpA
COG0056 F0F1-type ATP synthase, alpha subunit [Energy production and conversion].
 
   
 0.779
BAQ54686.1
Predicted transmembrane protein.
     
 0.764
BAQ54685.1
Pfam10896, DUF2714, Protein of unknown function (DUF2714), This family of proteins with unknown function appears to be restricted to Mycoplasmataceae.
       0.756
Your Current Organism:
Mycoplasma arginini
NCBI taxonomy Id: 2094
Other names: ATCC 23838, CIP 71.23, IFO 14476, M. arginini, MRL M1240/68, Mycoplasma leonis, NBRC 14476, NCTC 10129, strain G230
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