STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_17169Lamin-like protein. (172 aa)    
Predicted Functional Partners:
Pyn_32373
Exocyst complex component EXO84C.
  
     0.454
Pyn_27614
Uncharacterized protein.
  
     0.447
Pyn_29965
Uncharacterized protein.
  
     0.445
Pyn_37737
Exocyst complex component EXO84C.
  
     0.442
Pyn_27659
Disease resistance protein RPM1-like.
  
     0.433
Pyn_33065
RRM domain-containing protein.
  
     0.430
Pyn_05868
Putative ankyrin repeat protein isoform X2.
  
     0.425
Pyn_24784
DUF3444 domain-containing protein.
  
     0.424
Pyn_13718
Zinc finger CCCH domain-containing protein 22 isoform X1.
  
     0.418
Pyn_37265
bHLH-MYC_N domain-containing protein.
  
     0.408
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.