STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_41077BZIP transcription factor TGA10 isoform X1. (558 aa)    
Predicted Functional Partners:
Pyn_03047
Regulatory protein NPR1.
     
 0.870
Pyn_20045
Basic leucine zipper 23.
  
   
 0.592
Pyn_08160
PB1 domain-containing protein.
  
     0.504
Pyn_33531
Uncharacterized protein.
  
     0.500
Pyn_03964
Cyclic nucleotide-binding domain-containing protein.
  
     0.499
Pyn_10740
LOB domain-containing protein 21.
  
     0.496
Pyn_31056
Uncharacterized protein.
  
     0.496
Pyn_22977
LOB domain-containing protein 21.
  
     0.496
Pyn_08180
Protein LATERAL ORGAN BOUNDARIES.
  
     0.490
Pyn_23006
Glucan endo-1 3-beta-glucosidase 2.
  
     0.490
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.