STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_204305-nucleotidase domain-containing protein 4. (551 aa)    
Predicted Functional Partners:
Pyn_06724
Deoxycytidylate deaminase.
     
 0.891
Pyn_09810
dNK domain-containing protein.
     
 0.855
Pyn_36492
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.835
Pyn_30993
Cytidine deaminase 1.
     
 0.832
Pyn_40706
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 
 0.831
Pyn_19686
GMP synthase.
     
 0.827
Pyn_12058
Adenosine deaminase-like protein.
     
 0.709
Pyn_27693
Adenosine deaminase-like protein.
     
 0.709
Pyn_07090
AMP deaminase isoform X2.
     
 0.579
Pyn_29647
AMP deaminase isoform X2.
     
 0.579
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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