STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_15494Pentatricopeptide repeat-containing protein. (77 aa)    
Predicted Functional Partners:
Pyn_14820
60S ribosomal protein L13a-4.
  
 
   0.538
Pyn_27861
Kanadaptin.
  
     0.538
Pyn_39051
Uncharacterized protein.
  
 
   0.537
Pyn_23589
Protein NUCLEAR FUSION DEFECTIVE 4.
  
 
   0.535
Pyn_31884
Uncharacterized protein.
  
 
   0.535
Pyn_24240
Transcription factor VOZ1.
  
     0.534
Pyn_02124
Amino acid permease 3-like isoform X2.
  
     0.531
Pyn_06740
Uncharacterized protein.
  
     0.530
Pyn_12188
LOB domain-containing protein.
  
     0.526
Pyn_04285
LOB domain-containing protein.
  
     0.526
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.