STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_28245Pentatricopeptide repeat-containing protein. (122 aa)    
Predicted Functional Partners:
Pyn_03941
Protein BRANCHLESS TRICHOME.
  
     0.511
Pyn_33601
Uncharacterized protein.
  
     0.506
Pyn_30996
FA_FANCE domain-containing protein.
  
     0.481
Pyn_37352
Uncharacterized protein.
  
     0.474
Pyn_37353
Uncharacterized protein.
  
     0.473
Pyn_37349
Uncharacterized protein.
  
     0.471
Pyn_23884
Uncharacterized protein.
  
 
   0.470
Pyn_19759
Uncharacterized protein.
  
     0.467
Pyn_37340
Uncharacterized protein.
  
     0.467
Pyn_37345
Uncharacterized protein.
  
     0.463
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.