STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_23137UPF0481 protein. (205 aa)    
Predicted Functional Partners:
Pyn_00378
Plastid division protein CDP1 chloroplastic.
  
     0.530
Pyn_24647
UPF0481 protein.
  
     0.517
Pyn_40035
UPF0481 protein.
  
     0.513
Pyn_24653
UPF0481 protein.
  
     0.510
Pyn_16329
Uncharacterized protein.
  
     0.509
Pyn_16644
UPF0481 protein.
  
     0.503
Pyn_36500
Uncharacterized protein.
  
     0.500
Pyn_34452
Protein DETOXIFICATION 34.
  
     0.498
Pyn_40736
Uncharacterized protein.
  
     0.492
Pyn_16642
UPF0481 protein.
  
     0.490
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.