STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_11050Fe-S cluster assembly factor HCF101 chloroplastic isoform X2. (537 aa)    
Predicted Functional Partners:
Pyn_22149
NADH dehydrogenase.
  
 
 0.847
Pyn_06824
NADH dehydrogenase; Belongs to the complex I 75 kDa subunit family.
    
 0.802
Pyn_20805
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
     
 0.796
Pyn_05030
Acetylornithine deacetylase.
  
 
 0.777
Pyn_29057
Protein NAR1; Belongs to the NARF family.
   
 0.776
Pyn_39061
Protein NAR1; Belongs to the NARF family.
   
 0.776
Pyn_29217
Carnosine N-methyltransferase isoform X1.
     
 0.776
Pyn_13450
NADH-plastoquinone oxidoreductase subunit 7 (Plastid).
     
 0.743
Pyn_01099
Putative niFe hydrogenase-like protein.
     
 0.743
Pyn_20562
NADH-plastoquinone oxidoreductase subunit 7 (Chloroplast).
     
 0.743
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.