STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_26455Exonuclease DPD1 chloroplastic/mitochondrial. (208 aa)    
Predicted Functional Partners:
Pyn_30128
PCNA_N domain-containing protein.
  
 0.843
Pyn_00418
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.843
Pyn_30946
Uncharacterized protein.
  
 0.843
Pyn_30949
Uncharacterized protein.
  
 0.843
Pyn_30947
Uncharacterized protein.
  
 0.843
Pyn_30950
Uncharacterized protein.
  
 0.843
Pyn_09873
Oligoribonuclease.
   
 0.835
Pyn_19686
GMP synthase.
   
 
 0.743
Pyn_33511
Gamma-glutamyl peptidase 5-like.
   
 
 0.684
Pyn_30802
Gamma-glutamyl peptidase 5.
   
 
 0.684
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.