STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_18274Nuclear export mediator factor Nemf. (686 aa)    
Predicted Functional Partners:
Pyn_19873
Ribosomal protein L5.
   
   0.900
Pyn_03138
50S ribosomal protein L5 chloroplastic.
   
   0.899
Pyn_22702
60S ribosomal protein L7-2.
    
   0.876
Pyn_40336
60S ribosomal protein L7-2.
    
   0.876
Pyn_22321
60S ribosomal protein L5-2-like.
    
   0.875
Pyn_01434
60S ribosomal protein L5.
    
   0.875
Pyn_16250
60S ribosomal protein L5-2-like.
    
   0.875
Pyn_21708
E3 ubiquitin-protein ligase listerin isoform X1.
    
 
 0.874
Pyn_28129
Uncharacterized protein.
    
 
 0.874
Pyn_28130
RING-type domain-containing protein.
    
 
 0.874
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.