STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pyn_02088tRNA-specific adenosine deaminase 2. (191 aa)    
Predicted Functional Partners:
Pyn_12918
Putative inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1.
   
 0.972
Pyn_30993
Cytidine deaminase 1.
   
 0.720
Pyn_09810
dNK domain-containing protein.
    
 0.681
Pyn_12574
SnoaL-like domain-containing protein.
    
 0.661
Pyn_01315
SnoaL-like domain-containing protein.
    
 0.661
Pyn_27383
Uncharacterized protein.
    
 0.661
Pyn_10842
Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic.
    
 0.634
Pyn_10843
Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic.
    
 0.634
Pyn_33078
Putative uridine kinase.
     
 0.634
Pyn_36447
Monofunctional riboflavin biosynthesis protein RIBA 3 chloroplastic.
    
 0.634
Your Current Organism:
Prunus yedoensis
NCBI taxonomy Id: 2094558
Other names: P. yedoensis var. nudiflora, Prunus yedoensis var. nudiflora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.