STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA40758.1Branched-chain amino acid transport system substrate-binding protein. (383 aa)    
Predicted Functional Partners:
SDA60283.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
SDA60268.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
SDA60298.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.979
SDA60311.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.977
SDA49269.1
Response regulator receiver and ANTAR domain protein.
  
   0.748
SDA40769.1
L-asparaginase.
  
    0.482
Your Current Organism:
Allisonella histaminiformans
NCBI taxonomy Id: 209880
Other names: A. histaminiformans, ATCC BAA-610, Allisonella histaminiformans Garner et al. 2003, CCUG 48567, DSM 15230, strain MR2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.