STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA45682.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
SDA45633.1
Hypothetical protein.
       0.773
SDA45643.1
Hypothetical protein.
       0.773
SDA45654.1
Bacteriophage HK97-gp10, putative tail-component.
       0.773
SDA45672.1
Hypothetical protein.
       0.773
SDA45694.1
Phage tail sheath protein.
       0.746
SDA45704.1
Phage tail tube protein.
       0.698
SDA45619.1
Hypothetical protein.
       0.682
SDA45723.1
Phage XkdN-like tail assembly chaperone protein, TAC.
       0.642
SDA45609.1
Phage minor structural protein GP20.
       0.603
Your Current Organism:
Allisonella histaminiformans
NCBI taxonomy Id: 209880
Other names: A. histaminiformans, ATCC BAA-610, Allisonella histaminiformans Garner et al. 2003, CCUG 48567, DSM 15230, strain MR2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.