STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepALeucyl aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M17 family. (458 aa)    
Predicted Functional Partners:
glyA
Serine hydroxymethyltransferase 3; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.830
pdhD
Dihydrolipoamide dehydrogenase; Identified by sequence similarity; putative.
  
 
 0.630
gmk
Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP.
   
  0.623
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.606
pepP
Metallopeptidase M24 family protein; Identified by sequence similarity; putative.
  
 
 0.598
tkt
Putative transketolase transmembrane protein; Identified by sequence similarity; putative; Belongs to the transketolase family.
   
 
 0.523
AOD25586.1
ATPase AAA; Identified by sequence similarity; putative.
   
  
 0.459
pepF-1
Identified by sequence similarity; putative.
     
 0.456
pepF-2
Identified by sequence similarity; putative.
     
 0.456
ldh
L-lactate dehydrogenase; Identified by sequence similarity; putative; Belongs to the LDH/MDH superfamily.
  
 
 0.452
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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