STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25084.1ABC transporter, ATP-binding protein; Identified by sequence similarity; putative. (512 aa)    
Predicted Functional Partners:
AOD25085.1
ABC transporter, permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
AOD25086.1
ABC transporter, permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AOD25087.1
Hypothetical protein.
 
 
 0.976
AOD25508.1
Lipoprotein; Identified by sequence similarity; putative.
     
  0.800
AOD25082.1
Cytosine specific DNA methyltransferase; Identified by sequence similarity; putative.
       0.608
AOD25083.1
Hypothetical protein.
       0.608
pheT
phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; putative; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
      
 0.501
AOD25080.1
Hypothetical protein.
       0.441
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.441
AOD25079.1
Integration host factor alpha/beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.434
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.