STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cddMethyltransferase type 11; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (128 aa)    
Predicted Functional Partners:
AOD25589.1
Pyrimidine-nucleoside phosphorylase; Identified by sequence similarity; putative.
  
 
 0.956
deoD
Putative purine nucleoside phosphorylase transmembrane protein; Identified by sequence similarity; putative.
  
 
 0.954
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.933
tdk
Thymidine kinase; Identified by sequence similarity; putative.
    
 0.926
AOD25060.1
Putative 5' nucleotidase; Identified by sequence similarity; putative; Belongs to the 5'-nucleotidase family.
    
  0.905
ybeY
Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
    0.862
AOD25278.1
ABC transporter ATP-binding and permease protein; Identified by sequence similarity; putative.
       0.764
AOD25277.1
Hypothetical protein.
       0.723
AOD25280.1
Transcription termination factor; Identified by sequence similarity; putative.
  
    0.563
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.554
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.