STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25350.1Putative metal-dependent hydrolase; Identified by sequence similarity; putative. (227 aa)    
Predicted Functional Partners:
AOD25351.1
Hypothetical protein; Identified by sequence similarity; putative; Expressed protein.
 
     0.829
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.805
AOD25355.1
DHHA1 domain protein; Identified by sequence similarity; putative.
       0.805
AOD25352.1
CBS domain protein; Identified by sequence similarity; putative.
       0.800
dnaC
Replicative helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.800
cysS
Cysteinyl-tRNA synthetase; Identified by sequence similarity; putative.
       0.799
leuS
leucyl-tRNA synthetase; Identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.720
AOD25348.1
RNA methyltransferase, TrmH family; Identified by sequence similarity; putative; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.689
AOD25347.1
Hypothetical protein; Identified by sequence similarity; putative; Belongs to the sigma-70 factor family.
       0.637
fruA
PTS system, fructose-specific IIABC component; Identified by sequence similarity; putative.
       0.461
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.