STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25444.1Methyltransferase; Identified by sequence similarity; putative. (183 aa)    
Predicted Functional Partners:
AOD25442.1
Protein phosphatase 2C-like protein; Identified by sequence similarity; putative.
  
    0.835
rpe
Ribulose-phosphate 3-epimerase; Identified by sequence similarity; putative.
       0.830
rsgA
Putative ribosome biogenesis GTPase rsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.830
gmk
Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP.
       0.830
AOD25445.1
Rec0; Identified by sequence similarity; putative.
  
    0.794
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.562
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
     0.479
AOD25506.1
5'-3' exonuclease family protein; Identified by sequence similarity; putative.
     
 0.429
fruA
PTS system, fructose-specific IIABC component; Identified by sequence similarity; putative.
     
 0.403
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.