STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldh-2L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (313 aa)    
Predicted Functional Partners:
AOD25526.1
Pyruvate kinase; Identified by sequence similarity; putative; Belongs to the pyruvate kinase family.
  
 0.975
pdhB
Pyruvate dehydrogenase E1 component beta subunit; Identified by sequence similarity; putative.
  
 0.953
pdhA
Pyruvate dehydrogenase E1-alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.942
ldh
L-lactate dehydrogenase; Identified by sequence similarity; putative; Belongs to the LDH/MDH superfamily.
  
  
 
0.924
AOD25620.1
Phosphoglucose isomerase family protein; Identified by sequence similarity; putative.
  
 
 0.904
tkt
Putative transketolase transmembrane protein; Identified by sequence similarity; putative; Belongs to the transketolase family.
  
 0.895
fba
Fructose-bisphosphate aldolase; Identified by sequence similarity; putative.
   
 
 0.885
pgi
Glucose-6-phosphate isomerase; Identified by sequence similarity; putative.
  
 
 0.879
deoC
Deoxyribose-phosphate aldolase 1; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
  0.800
gap
Glyceraldehyde 3-phosphate dehydrogenase C; Identified by sequence similarity; putative; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.750
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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