STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25480.13-keto-L-gulonate 6-phosphate decarboxylase; Identified by sequence similarity; putative. (224 aa)    
Predicted Functional Partners:
AOD25479.1
L-xylulose 5-phosphate 3-epimerase; Identified by sequence similarity; putative.
 
 
 0.997
araD
Sugar isomerase SgaE; Identified by sequence similarity; putative.
 
  
 0.917
AOD25477.1
Hypothetical protein.
       0.828
AOD25476.1
Hypothetical protein.
       0.806
AOD25482.1
Pentitol phosphotransferase enzyme II, B component; Identified by sequence similarity; putative.
  
  
 0.767
sgaA
Pentitol phosphotransferase enzyme II, A component; Identified by sequence similarity; putative.
  
  
 0.709
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.