STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25489.1Putative spermidine/putrescine substrate binding protein; Identified by sequence similarity; putative. (574 aa)    
Predicted Functional Partners:
potC
Spermidine Putrescine ABC transporter permease component potC; Identified by sequence similarity; putative.
  
 
 0.994
potB
Spermidine/putrescine ABC transporter permease; Identified by sequence similarity; putative.
  
 
 0.994
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
    
 0.973
AOD25269.1
ABC transporter permease; Identified by sequence similarity; putative.
 
   
 0.818
AOD25072.1
Uncharactized lipoprotein; Identified by sequence similarity; putative.
  
  
 0.787
AOD25215.1
Hypothetical protein.
  
     0.775
AOD25659.1
Hypothetical protein.
  
     0.775
oppA-2
Oligopeptide ABC transporter, substrate-binding lipoprotein OppA; Identified by sequence similarity; putative.
  
     0.775
AOD25026.1
Substrate-specific component FolT of folate ECF transporter; Identified by sequence similarity; putative.
  
     0.774
AOD25142.1
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.
  
     0.774
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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