STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD25675.1Sua5/YciO/YrdC/YwlC family protein; Identified by sequence similarity; putative; Belongs to the SUA5 family. (243 aa)    
Predicted Functional Partners:
rpiB
Ribose-5-phosphate isomerase B; Identified by sequence similarity; putative.
       0.830
fpg
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
       0.824
AOD25676.1
ABC transporter, permease protein; Identified by sequence similarity; putative.
       0.774
AOD25672.1
Hypothetical protein.
       0.773
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   0.568
AOD25506.1
5'-3' exonuclease family protein; Identified by sequence similarity; putative.
  
  
 0.564
AOD25259.1
Hypothetical protein.
 
     0.544
oppA-2
Oligopeptide ABC transporter, substrate-binding lipoprotein OppA; Identified by sequence similarity; putative.
 
     0.540
AOD25069.1
Metal-dependent protease, putative molecular chaperone; Identified by sequence similarity; putative.
 
   
 0.520
AOD25266.1
Methyltransferase, HemK family; Identified by sequence similarity; putative.
  
  
 0.494
Your Current Organism:
Mycoplasma hyorhinis
NCBI taxonomy Id: 2100
Other names: ATCC 17981, ATCC 23234, Asterococcus hyorhinis, CIP 104968, DSM 25591, IFO 14858, M. hyorhinis, NBRC 14858, NCTC 10130, strain BTS 7, strain BTS-7, strain BTS7, strain PG42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.