STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_1483cConserved hypothetical protein; Best Blastp Hit: dbj|BAB04222.1| (AP001508) unknown conserved protein in others [Bacillus halodurans]. (151 aa)    
Predicted Functional Partners:
SMU_1482c
Conserved hypothetical protein; Best Blastp Hit: gb|AAD28224.1|AF121254_6 (AF121254) unknown [Enterococcus faecium].
       0.785
SMU_1486c
Best Blastp Hit: pir||E72330 conserved hypothetical protein - Thermotoga maritima (strain MSB8) >gi|4981334|gb|AAD35886.1|AE001748_2 (AE001748) conserved hypothetical protein [Thermotoga maritima]; Belongs to the PHP hydrolase family. HisK subfamily.
       0.573
SMU_1484c
Conserved hypothetical protein; Best Blastp Hit: emb|CAB72624.1| (AL139074) hypothetical protein Cj0140 [Campylobacter jejuni].
       0.558
SMU_1485c
Putative endonuclease; Best Blastp Hit: emb|CAB72623.1| (AL139074) putative endonuclease [Campylobacter jejuni].
       0.554
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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