STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_209cHypothetical protein; Best Blastp Hit: pir||E69774 hypothetical protein ydcP [imported] - Bacillus subtilis >gi|1881295|dbj|BAA19322.1| (AB001488) SIMILAR TO ORF22 AND ORF23 OF ENTEROCOCCUS FAECALIS TRANSPOSON TN916. [Bacillus subtilis] >gi|2632785|emb|CAB12292.1| (Z99106) similar to transposon protein [Bacillus subtilis]. (141 aa)    
Predicted Functional Partners:
SMU_208c
Putative transposon protein; Best Blastp Hit: pir||F69774 hypothetical protein ydcQ [imported] - Bacillus subtilis >gi|1881296|dbj|BAA19323.1| (AB001488) SIMILAR TO ORF21 OF ENTEROCOCCUS FAECALIS TRANSPOSON TN916. [Bacillus subtilis] >gi|2632786|emb|CAB12293.1| (Z99106) similar to transposon protein [Bacillus subtilis].
       0.755
SMU_210c
Hypothetical protein.
       0.714
SMU_206c
Hypothetical protein.
       0.414
SMU_207c
Putative transposon protein; Best Blastp Hit: pir||G69774 transposon-related protein homolog ydcR - Bacillus subtilis >gi|1881297|dbj|BAA19324.1| (AB001488) SIMILAR TO ORF20 OF ENTEROCOCCUS FAECALIS TRANSPOSON TN916. [Bacillus subtilis] >gi|2632787|emb|CAB12294.1| (Z99106) similar to transposon protein [Bacillus subtilis].
       0.414
SMU_211c
Hypothetical protein.
       0.403
SMU_212c
Hypothetical protein; Best Blastp Hit: pir||H70239 hypothetical protein BBI01 - Lyme disease spirochete plasmid I/lp28-4 >gi|2690108|gb|AAC66211.1| (AE000789) B. burgdorferi predicted coding region BBI01 [Borrelia burgdorferi].
       0.403
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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