STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_472Conserved hypothetical protein; Best Blastp Hit: sp|P50840|YPSC_BACSU HYPOTHETICAL 43.5 KD PROTEIN IN COTD-KDUD INTERGENIC REGION PRECURSOR >gi|7459586|pir||F69941 conserved hypothetical protein ypsC - Bacillus subtilis >gi|1146183|gb|AAB38473.1| (L47838) putative [Bacillus subtilis] >gi|2634636|emb|CAB14134.1| (Z99115) similar to hypothetical proteins [Bacillus subtilis]; Belongs to the methyltransferase superfamily. (384 aa)    
Predicted Functional Partners:
SMU_776
Conserved hypothetical protein; Best Blastp Hit: sp|P39587|YWBD_BACSU HYPOTHETICAL 44.4 KD PROTEIN IN EPR-GALK INTERGENIC REGION >gi|629026|pir||S39674 ywbD protein - Bacillus subtilis >gi|413943|emb|CAA51575.1| (X73124) ipa-19d [Bacillus subtilis] >gi|2636371|emb|CAB15862.1| (Z99123) alternate gene name: ipa-19d similar to hypothetical proteins [Bacillus subtilis].
 
  
 0.990
SMU_1779c
Best Blastp Hit: pir||F69806 RNA methyltransferase homolog yfjO - Bacillus subtilis >gi|2633126|emb|CAB12631.1| (Z99108) similar## to RNA methyltransferase [Bacillus subtilis] >gi|2780399|dbj|BAA24300.1| (D78509) YfjO [Bacillus subtilis]; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.902
SMU_788
Putative RNA methyltransferase; Best Blastp Hit: dbj|BAB04406.1| (AP001509) RNA methyltransferase [Bacillus halodurans]; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.902
cdd
Putative cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.750
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.655
mapZ
Conserved hypothetical protein; Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning.
       0.594
SMU_993
Putative GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
  
 0.529
argS
Putative arginyl-tRNA synthase; Best Blastp Hit: gb|AAF86984.1|AF282249_3 (AF282249) ArgS [Lactococcus lactis subsp. lactis].
 
    0.521
uppS
Putative undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
    0.487
pnpA
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
   
    0.485
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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