STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_899Conserved hypothetical protein; Best Blastp Hit: dbj|BAB07346.1| (AP001519) unknown conserved protein [Bacillus halodurans]. (281 aa)    
Predicted Functional Partners:
SMU_229
Best Blastp Hit: pir||E69879 conserved hypothetical protein yloV - Bacillus subtilis >gi|2337813|emb|CAA74257.1| (Y13937) YloV protein [Bacillus subtilis] >gi|2633956|emb|CAB13457.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis].
   0.980
SMU_898
Conserved hypothetical protein; Best Blastp Hit: pir||T07589 disease resistance protein Prf - tomato >gi|1513144|gb|AAC49408.1| (U65391) PRF [Lycopersicon esculentum].
  
    0.804
SMU_902
Best Blastp Hit: pir||A69814 ABC transporter (ATP-binding protein) homolog yfmR - Bacillus subtilis >gi|2116756|dbj|BAA20107.1| (D86418) YfmR [Bacillus subtilis] >gi|2633050|emb|CAB12556.1| (Z99107) similar to ABC transporter (ATP-binding protein) [Bacillus subtilis] >gi|2633061|emb|CAB12566.1| (Z99108) similar to ABC transporter (ATP-binding protein) [Bacillus subtilis].
     
 0.785
dapB
Putative dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
       0.781
papS
Putative poly(A) polymerase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
       0.781
SMU_228
Best Blastp Hit: pir||D69879 alkaline-shock protein homolog yloU - Bacillus subtilis >gi|2337812|emb|CAA74256.1| (Y13937) putative Asp23 protein [Bacillus subtilis] >gi|2633955|emb|CAB13456.1| (Z99112) similar to alkaline-shock protein [Bacillus subtilis].
 
    0.665
SMU_895
Possible DNA-damage-inducible protein; Best Blastp Hit: gb|AAF84880.1|AE004023_16 (AE004023) DNA-damage-inducible protein [Xylella fastidiosa].
       0.437
SMU_896
Conserved hypothetical protein; Best Blastp Hit: sp|Q47149|YAFQ_ECOLI HYPOTHETICAL 10.8 KD PROTEIN IN GMHA-DINJ INTERGENIC REGION >gi|7449369|pir||B64747 yafQ protein - Escherichia coli >gi|984581|dbj|BAA07587.1| (D38582) YafQ [Escherichia coli] >gi|1786419|gb|AAC73329.1| (AE000131) orf, hypothetical protein [Escherichia coli] >gi|4902961|dbj|BAA77895.1| (D83536) Hypothetical protein HI0711 [Escherichia coli].
       0.437
SMU_897
Putative type I restriction-modification system, helicase subunits; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.437
dinG
Putative ATP-dependent DNA helicase; 3'-5' exonuclease.
  
    0.419
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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