CCACVL1_28841 protein (Corchorus capsularis)

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Score

CCACVL1_28841

Helicase ATP-binding domain-containing protein. (696 aa)

Predicted Functional Partners:

CCACVL1_21740

0.958

CCACVL1_04742

0.937

CCACVL1_11513

0.930

CCACVL1_11995

0.929

CCACVL1_07767

0.929

CCACVL1_23206

0.904

CCACVL1_07886

0.897

CCACVL1_20259

0.874

CCACVL1_07113

0.874

CCACVL1_19468

0.868

Your Current Organism:

Corchorus capsularis

NCBI taxonomy Id: 210143
Other names: C. capsularis, jute

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCACVL1_04742	CCACVL1_07113	A0A1R3JPU0	A0A1R3J9C6	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.998
CCACVL1_04742	CCACVL1_07767	A0A1R3JPU0	A0A1R3J460	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
CCACVL1_04742	CCACVL1_11513	A0A1R3JPU0	A0A1R3IKS2	Sm domain-containing protein.	Sm domain-containing protein.	0.999
CCACVL1_04742	CCACVL1_11995	A0A1R3JPU0	A0A1R3II77	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.999
CCACVL1_04742	CCACVL1_19468	A0A1R3JPU0	A0A1R3HGJ3	Sm domain-containing protein.	Uncharacterized protein.	0.974
CCACVL1_04742	CCACVL1_20259	A0A1R3JPU0	A0A1R3HBZ4	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.998
CCACVL1_04742	CCACVL1_23206	A0A1R3JPU0	A0A1R3GUX8	Sm domain-containing protein.	SEC63 domain-containing protein.	0.968
CCACVL1_04742	CCACVL1_28841	A0A1R3JPU0	A0A1R3G526	Sm domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.937
CCACVL1_07113	CCACVL1_04742	A0A1R3J9C6	A0A1R3JPU0	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Sm domain-containing protein.	0.998
CCACVL1_07113	CCACVL1_07767	A0A1R3J9C6	A0A1R3J460	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.998
CCACVL1_07113	CCACVL1_11513	A0A1R3J9C6	A0A1R3IKS2	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Sm domain-containing protein.	0.995
CCACVL1_07113	CCACVL1_11995	A0A1R3J9C6	A0A1R3II77	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
CCACVL1_07113	CCACVL1_19468	A0A1R3J9C6	A0A1R3HGJ3	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.964
CCACVL1_07113	CCACVL1_23206	A0A1R3J9C6	A0A1R3GUX8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	SEC63 domain-containing protein.	0.935
CCACVL1_07113	CCACVL1_28841	A0A1R3J9C6	A0A1R3G526	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Helicase ATP-binding domain-containing protein.	0.874
CCACVL1_07767	CCACVL1_04742	A0A1R3J460	A0A1R3JPU0	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
CCACVL1_07767	CCACVL1_07113	A0A1R3J460	A0A1R3J9C6	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.998
CCACVL1_07767	CCACVL1_11513	A0A1R3J460	A0A1R3IKS2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
CCACVL1_07767	CCACVL1_11995	A0A1R3J460	A0A1R3II77	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
CCACVL1_07767	CCACVL1_19468	A0A1R3J460	A0A1R3HGJ3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.977