Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_23275Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (432 aa)    
Predicted Functional Partners:
CCACVL1_07180
Recoverin.
    
 0.949
CCACVL1_05270
Recoverin.
    
 0.949
CCACVL1_11847
Uncharacterized protein.
   
 0.943
CCACVL1_11182
Recoverin.
    
 0.943
CCACVL1_25042
Uncharacterized protein.
    
 0.811
CCACVL1_09177
TYR_PHOSPHATASE_2 domain-containing protein.
    
 0.811
CCACVL1_28679
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.795
CCACVL1_30101
WD_REPEATS_REGION domain-containing protein.
    
 0.789
CCACVL1_09995
Carboxyl transferase.
    
 0.759
CCACVL1_06580
Calcium-binding EF-hand.
    
 0.758
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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