STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_21875Beclin family. (518 aa)    
Predicted Functional Partners:
CCACVL1_18499
UV radiation resistance protein/autophagy-related protein 14.
    
 0.999
CCACVL1_14540
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.999
CCACVL1_11781
CLIP-associated protein.
    
 0.999
CCACVL1_21158
Protein kinase domain-containing protein.
    
 0.993
CCACVL1_01634
Protein kinase domain-containing protein.
    
 0.993
CCACVL1_19719
Autophagy-related protein 11.
    
 0.991
CCACVL1_09262
Autophagy-related protein 17.
    
 0.991
CCACVL1_26306
Uncharacterized protein.
    
 0.952
CCACVL1_10376
Ovarian tumor, otubain.
    
 0.946
CCACVL1_23695
SNARE associated Golgi protein family.
    
 0.933
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.