STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_21716Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
CCACVL1_07228
Structural maintenance of chromosomes protein.
   
 0.988
CCACVL1_09831
DUF641 domain-containing protein.
   
 0.979
CCACVL1_02573
Structural maintenance of chromosomes protein.
   
 0.979
CCACVL1_27245
Cohesin loading factor.
    
 0.967
CCACVL1_30414
RecF/RecN/SMC.
   
 0.960
CCACVL1_30671
Glutaredoxin.
   
 0.956
CCACVL1_30584
Uncharacterized protein.
   
 0.956
CCACVL1_19259
Uncharacterized protein.
   
 0.956
CCACVL1_02164
Uncharacterized protein.
   
 0.956
CCACVL1_13787
Structural maintenance of chromosomes protein.
   
 0.948
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.