STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_20466Uncharacterized protein. (784 aa)    
Predicted Functional Partners:
CCACVL1_17557
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.930
CCACVL1_16807
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.638
CCACVL1_03482
Thymidylate synthase.
    
 0.638
CCACVL1_28264
Thymidine kinase.
     
 0.600
CCACVL1_15283
Thymidine kinase.
     
 0.600
CCACVL1_27278
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.
    
  0.553
CCACVL1_08630
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.
    
  0.553
CCACVL1_02937
RNA-processing protein, HAT helix.
    
  0.553
CCACVL1_26650
BTP domain-containing protein.
  
 
   0.548
CCACVL1_24099
AAI domain-containing protein.
  
     0.519
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.