STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_17433Sucrose synthase; Belongs to the glycosyltransferase 1 family. (1053 aa)    
Predicted Functional Partners:
CCACVL1_30439
Sucrose-phosphate phosphatase.
  
 0.965
CCACVL1_05620
Sucrose-phosphate phosphatase.
  
 0.964
CCACVL1_07769
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
 0.937
CCACVL1_13322
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.931
CCACVL1_22205
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
  
  
0.919
CCACVL1_10574
Nucleotidyl transferase.
  
 0.908
CCACVL1_06153
Ribosomal protein S2.
   
 
 0.908
CCACVL1_24555
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.906
CCACVL1_20619
Thioredoxin-like protein.
     
 0.904
CCACVL1_15068
Glycosyl transferase, family 20.
   
 0.901
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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