STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_16987Cystathionine beta-synthase, core. (233 aa)    
Predicted Functional Partners:
CCACVL1_24400
GMP_synt_C domain-containing protein.
  
 0.772
CCACVL1_13601
Uncharacterized protein.
  
 0.772
CCACVL1_10306
Glutamine amidotransferase type 1.
  
 
 0.756
CCACVL1_04159
Glutamine amidotransferase type 1.
  
 
 0.756
CCACVL1_16389
Urease accessory protein UreD.
  
 
 0.746
CCACVL1_16387
AICARFT/IMPCHase bienzyme.
  
 
 0.746
CCACVL1_28679
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.720
CCACVL1_23852
Anthranilate synthase/para-aminobenzoate synthase, glutamine amidotransferase.
  
 
 0.685
CCACVL1_24220
Lipase, GDSL.
    
  0.681
CCACVL1_14540
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.666
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.