STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_16458Barwin-related endoglucanase. (188 aa)    
Predicted Functional Partners:
CCACVL1_04420
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.530
CCACVL1_05760
Hexose carrier protein HEX6-like protein.
  
     0.528
CCACVL1_27890
2S globulin; Belongs to the glycosyl hydrolase 18 family.
  
     0.515
CCACVL1_20421
2S globulin; Belongs to the glycosyl hydrolase 18 family.
  
     0.514
CCACVL1_20432
2S globulin; Belongs to the glycosyl hydrolase 18 family.
  
     0.509
CCACVL1_20422
2S globulin; Belongs to the glycosyl hydrolase 18 family.
  
     0.497
CCACVL1_13155
Uncharacterized protein.
  
     0.477
CCACVL1_16218
Uncharacterized protein.
  
     0.463
CCACVL1_04025
Uncharacterized protein.
  
     0.463
CCACVL1_15808
Uncharacterized protein.
  
     0.460
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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