Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCACVL1_03083 | CCACVL1_07708 | A0A1R3K345 | A0A1R3J4C3 | No apical meristem (NAM) protein. | Uncharacterized protein. | 0.445 |
CCACVL1_03083 | CCACVL1_09034 | A0A1R3K345 | A0A1R3IY13 | No apical meristem (NAM) protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.490 |
CCACVL1_03083 | CCACVL1_12998 | A0A1R3K345 | A0A1R3ICQ3 | No apical meristem (NAM) protein. | F-box domain-containing protein. | 0.432 |
CCACVL1_07708 | CCACVL1_03083 | A0A1R3J4C3 | A0A1R3K345 | Uncharacterized protein. | No apical meristem (NAM) protein. | 0.445 |
CCACVL1_07708 | CCACVL1_12998 | A0A1R3J4C3 | A0A1R3ICQ3 | Uncharacterized protein. | F-box domain-containing protein. | 0.442 |
CCACVL1_07708 | CCACVL1_18952 | A0A1R3J4C3 | A0A1R3HJB1 | Uncharacterized protein. | Remorin_C domain-containing protein. | 0.486 |
CCACVL1_07708 | CCACVL1_21430 | A0A1R3J4C3 | A0A1R3H5R4 | Uncharacterized protein. | Uncharacterized protein. | 0.471 |
CCACVL1_07708 | CCACVL1_27084 | A0A1R3J4C3 | A0A1R3GC57 | Uncharacterized protein. | Uncharacterized protein. | 0.444 |
CCACVL1_07708 | CCACVL1_27122 | A0A1R3J4C3 | A0A1R3GC23 | Uncharacterized protein. | VQ motif-containing protein. | 0.411 |
CCACVL1_08886 | CCACVL1_12998 | A0A1R3IYE9 | A0A1R3ICQ3 | Uncharacterized protein. | F-box domain-containing protein. | 0.463 |
CCACVL1_09034 | CCACVL1_03083 | A0A1R3IY13 | A0A1R3K345 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | No apical meristem (NAM) protein. | 0.490 |
CCACVL1_09034 | CCACVL1_12998 | A0A1R3IY13 | A0A1R3ICQ3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | F-box domain-containing protein. | 0.607 |
CCACVL1_09034 | CCACVL1_18952 | A0A1R3IY13 | A0A1R3HJB1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Remorin_C domain-containing protein. | 0.424 |
CCACVL1_09034 | CCACVL1_21430 | A0A1R3IY13 | A0A1R3H5R4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.505 |
CCACVL1_11748 | CCACVL1_12998 | A0A1R3IJR6 | A0A1R3ICQ3 | Pentatricopeptide repeat-containing protein. | F-box domain-containing protein. | 0.451 |
CCACVL1_11748 | CCACVL1_15296 | A0A1R3IJR6 | A0A1R3I2X0 | Pentatricopeptide repeat-containing protein. | Ubiquitin-protein ligase 7. | 0.411 |
CCACVL1_11748 | CCACVL1_18952 | A0A1R3IJR6 | A0A1R3HJB1 | Pentatricopeptide repeat-containing protein. | Remorin_C domain-containing protein. | 0.402 |
CCACVL1_11748 | CCACVL1_27122 | A0A1R3IJR6 | A0A1R3GC23 | Pentatricopeptide repeat-containing protein. | VQ motif-containing protein. | 0.400 |
CCACVL1_12998 | CCACVL1_03083 | A0A1R3ICQ3 | A0A1R3K345 | F-box domain-containing protein. | No apical meristem (NAM) protein. | 0.432 |
CCACVL1_12998 | CCACVL1_07708 | A0A1R3ICQ3 | A0A1R3J4C3 | F-box domain-containing protein. | Uncharacterized protein. | 0.442 |
page 1 of 3