STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_11111Protein kinase domain-containing protein. (945 aa)    
Predicted Functional Partners:
CCACVL1_13980
BRI1 kinase inhibitor 1-like protein.
    
 0.893
CCACVL1_20059
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.835
CCACVL1_30392
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.736
CCACVL1_16324
Translation elongation factor EF1B, gamma chain, conserved; Belongs to the GST superfamily.
    
  0.554
CCACVL1_23040
Protein kinase domain-containing protein.
    
 0.553
CCACVL1_14143
Protein kinase domain-containing protein.
    
 0.476
CCACVL1_13616
Protein kinase domain-containing protein.
    
 0.476
CCACVL1_02622
Uncharacterized protein.
    
 0.476
CCACVL1_02623
Protein kinase domain-containing protein.
    
 0.476
CCACVL1_04742
Sm domain-containing protein.
    
  0.436
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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